# TissueNet: Detect Lesions in Cervical Biopsies **URL:** https://community.drivendata.org/c/tissuenet-cervical-biopsies/37.md [Latest](https://community.drivendata.org/latest.md) · [Categories](https://community.drivendata.org/categories.md) --- ## [About the TissueNet: Detect Lesions in Cervical Biopsies category](https://community.drivendata.org/t/about-the-tissuenet-detect-lesions-in-cervical-biopsies-category/5038)
**Author:** [@emily](https://community.drivendata.org/u/emily)\ **Replies:** 0
This category is for posts about the TissueNet: Detect Lesions in Cervical Biopsies competition. Please keep all posts here specific to the competition. --- ## [Availability of data after the challenge](https://community.drivendata.org/t/availability-of-data-after-the-challenge/5872)
**Author:** [@AgatheDelaune](https://community.drivendata.org/u/AgatheDelaune)\ **Replies:** 4\ **Last updated:** [July 6, 2023, 9:38pm UTC](https://community.drivendata.org/t/availability-of-data-after-the-challenge/5872 "2023-07-06T21:38:28Z")
Dear participants, We are planning to make the challenge data publicly available in the following months. We are currently working in order to comply with all the regulations needed to make the data publicly available.… --- ## [Article publication about the TissueNet challenge results](https://community.drivendata.org/t/article-publication-about-the-tissuenet-challenge-results/5864)
**Author:** [@AgatheDelaune](https://community.drivendata.org/u/AgatheDelaune)\ **Replies:** 1\ **Last updated:** [February 18, 2021, 3:33pm UTC](https://community.drivendata.org/t/article-publication-about-the-tissuenet-challenge-results/5864 "2021-02-18T15:33:29Z")
Dear participants, as organizers of the TissueNet Data Challenge, we are planning to publish an article about the competition and its results as it was a great scientific project. We would like to include the first 8 te… --- ## [Submissions after challenge](https://community.drivendata.org/t/submissions-after-challenge/5785)
**Author:** [@rogertrullo](https://community.drivendata.org/u/rogertrullo)\ **Replies:** 0\ **Last updated:** [January 19, 2021, 5:15pm UTC](https://community.drivendata.org/t/submissions-after-challenge/5785 "2021-01-19T17:15:04Z")
Hi, I was wondering if the challenge will keep ongoing like they usually do in the computer vision community e.g. the Pascal challenge. I think it could be very helpful for the community to keep the challenges open even … --- ## [Looking for people to collaborate!](https://community.drivendata.org/t/looking-for-people-to-collaborate/5055)
**Author:** [@derevirn](https://community.drivendata.org/u/derevirn)\ **Replies:** 5\ **Last updated:** [September 13, 2020, 2:25am UTC](https://community.drivendata.org/t/looking-for-people-to-collaborate/5055 "2020-09-13T02:25:38Z")
Hello everyone, I am interested in the TissueNet competition, and I am currently looking for people to form a team. I am a data scientist, experienced in machine learning and deep learning, but my knowledge about cancer… --- ## [Test Dataset available?](https://community.drivendata.org/t/test-dataset-available/5465)
**Author:** [@Ambistic](https://community.drivendata.org/u/Ambistic)\ **Replies:** 2\ **Last updated:** [December 22, 2020, 3:37am UTC](https://community.drivendata.org/t/test-dataset-available/5465 "2020-12-22T03:37:36Z")
Hello, Will the test dataset will be available for downloading ? Thank you --- ## [Access to other participants' solutions](https://community.drivendata.org/t/access-to-other-participants-solutions/5513)
**Author:** [@rmormont](https://community.drivendata.org/u/rmormont)\ **Replies:** 1\ **Last updated:** [December 2, 2020, 2:18pm UTC](https://community.drivendata.org/t/access-to-other-participants-solutions/5513 "2020-12-02T14:18:04Z")
Hi, Now that the challenge is over, I would be interested in learning how top teams have tackled the challenge. Will their solution be made available to the community ? Best, Romain --- ## [Some questions about the competition](https://community.drivendata.org/t/some-questions-about-the-competition/5453)
**Author:** [@AndrewTal](https://community.drivendata.org/u/AndrewTal)\ **Replies:** 3\ **Last updated:** [November 7, 2020, 4:31am UTC](https://community.drivendata.org/t/some-questions-about-the-competition/5453 "2020-11-07T04:31:41Z")
Competition rules. The game rules are not stated anywhere in the game, but your default rules, which are unfair to newcomers to Drivendata. Two test sets. Since all submissions have results on the two validation set… --- ## [Leaderboard result](https://community.drivendata.org/t/leaderboard-result/5427)
**Author:** [@AndrewTal](https://community.drivendata.org/u/AndrewTal)\ **Replies:** 3\ **Last updated:** [November 1, 2020, 2:34am UTC](https://community.drivendata.org/t/leaderboard-result/5427 "2020-11-01T02:34:04Z")
Why is the final list result different from the historical record? --- ## [End of challenge](https://community.drivendata.org/t/end-of-challenge/5423)
**Author:** [@trislaz](https://community.drivendata.org/u/trislaz)\ **Replies:** 1\ **Last updated:** [October 29, 2020, 6:56pm UTC](https://community.drivendata.org/t/end-of-challenge/5423 "2020-10-29T18:56:46Z")
Good evening, My penultimate submission is queueing since yesterday, and the challenge is ending soon. Is there a way to use my last submission attempt (Currently 1/2) for a final submission ? Or am I forced to cancel … --- ## [Download pretrained model during inference](https://community.drivendata.org/t/download-pretrained-model-during-inference/5425)
**Author:** [@NarenWulan](https://community.drivendata.org/u/NarenWulan)\ **Replies:** 1\ **Last updated:** [October 29, 2020, 6:37pm UTC](https://community.drivendata.org/t/download-pretrained-model-during-inference/5425 "2020-10-29T18:37:15Z")
During running, my main.py will automatically download a pretrained model to a specific file shown as follows: How could I fix this? Could you please help me download the model and put it into the right path? Or shoul… --- ## [Could not found main.py in submission.zip](https://community.drivendata.org/t/could-not-found-main-py-in-submission-zip/5395)
**Author:** [@NarenWulan](https://community.drivendata.org/u/NarenWulan)\ **Replies:** 1\ **Last updated:** [October 26, 2020, 8:37am UTC](https://community.drivendata.org/t/could-not-found-main-py-in-submission-zip/5395 "2020-10-26T08:37:09Z")
After my uploaded submission file was unzipped, it showed me the error as follows: It seems that there is main.py file but why it says it couldn’t find it? Could someone help me check with this? Thank you! @bull --- ## [Looking for someone to strengthen my team](https://community.drivendata.org/t/looking-for-someone-to-strengthen-my-team/5317)
**Author:** [@ngcferreira](https://community.drivendata.org/u/ngcferreira)\ **Replies:** 1\ **Last updated:** [October 23, 2020, 8:02am UTC](https://community.drivendata.org/t/looking-for-someone-to-strengthen-my-team/5317 "2020-10-23T08:02:35Z")
Hi there, I’m currently in 9th place, and I was wondering if anyone in the first 8 places of the leaderboard would like to join forces? My team is TissueNetTeam, and I have some interesting models, which I hope will en… --- ## [Submissions do not run, logs dont show anything](https://community.drivendata.org/t/submissions-do-not-run-logs-dont-show-anything/5339)
**Author:** [@Voltaire](https://community.drivendata.org/u/Voltaire)\ **Replies:** 2\ **Last updated:** [October 19, 2020, 8:53am UTC](https://community.drivendata.org/t/submissions-do-not-run-logs-dont-show-anything/5339 "2020-10-19T08:53:07Z")
My logs are stuck at “Running submission with Python”. Not even a print appears. Is something wrong with the machines running the code? --- ## [Why my submission is killed before it's finished](https://community.drivendata.org/t/why-my-submission-is-killed-before-its-finished/5302)
**Author:** [@acdart](https://community.drivendata.org/u/acdart)\ **Replies:** 1\ **Last updated:** [October 18, 2020, 4:59am UTC](https://community.drivendata.org/t/why-my-submission-is-killed-before-its-finished/5302 "2020-10-18T04:59:53Z")
the error message: /inference/entrypoint.sh: line 44: 15 Killed python main.py --- ## [Leaderboard positions after the competition finishes](https://community.drivendata.org/t/leaderboard-positions-after-the-competition-finishes/5240)
**Author:** [@psxmj3](https://community.drivendata.org/u/psxmj3)\ **Replies:** 1\ **Last updated:** [October 15, 2020, 5:06pm UTC](https://community.drivendata.org/t/leaderboard-positions-after-the-competition-finishes/5240 "2020-10-15T17:06:22Z")
Hello, will we still be able to submit our results after the end of the challenge, and if yes will these be published on the leaderboard? Thank you. --- ## [Submissions at the end of the competition](https://community.drivendata.org/t/submissions-at-the-end-of-the-competition/5326)
**Author:** [@jearly](https://community.drivendata.org/u/jearly)\ **Replies:** 2\ **Last updated:** [October 15, 2020, 5:04pm UTC](https://community.drivendata.org/t/submissions-at-the-end-of-the-competition/5326 "2020-10-15T17:04:07Z")
If we have code submissions that are still pending/running when the competition finishes, will these be executed and added to the leaderboard or will they be stopped? --- ## [Team to merge------](https://community.drivendata.org/t/team-to-merge/5320)
**Author:** [@yangsenwxy](https://community.drivendata.org/u/yangsenwxy)\ **Replies:** 0\ **Last updated:** [October 14, 2020, 3:46am UTC](https://community.drivendata.org/t/team-to-merge/5320 "2020-10-14T03:46:58Z")
My current score is 0.9105, And I have 40 Gpus. If you want to form a team, please contact me at ys810137152@gmail.com --- ## [Add more machines](https://community.drivendata.org/t/add-more-machines/5307)
**Author:** [@yangsenwxy](https://community.drivendata.org/u/yangsenwxy)\ **Replies:** 1\ **Last updated:** [October 13, 2020, 12:59pm UTC](https://community.drivendata.org/t/add-more-machines/5307 "2020-10-13T12:59:09Z")
Can you add more machines, this queue for several hours。 --- ## [IDs are not correct](https://community.drivendata.org/t/ids-are-not-correct/5280)
**Author:** [@AndrewTal](https://community.drivendata.org/u/AndrewTal)\ **Replies:** 2\ **Last updated:** [October 8, 2020, 3:51pm UTC](https://community.drivendata.org/t/ids-are-not-correct/5280 "2020-10-08T15:51:24Z")
I submit my code and generated a submission.csv. but I got this error: IDs for submission are not correct. My code: submit\_csv = pd.DataFrame(columns=\[‘filename’, 0, 1, 2, 3\]) wsi\_list = glob.glob(’./data/\*.tif’) fo… --- ## [Recovering logs from submissions](https://community.drivendata.org/t/recovering-logs-from-submissions/5108)
**Author:** [@brice\_tayart](https://community.drivendata.org/u/brice_tayart)\ **Replies:** 3\ **Last updated:** [October 4, 2020, 1:07pm UTC](https://community.drivendata.org/t/recovering-logs-from-submissions/5108 "2020-10-04T13:07:46Z")
Is there a way to recover custom logs from submissions? Below is a sample minimal code that times the processing of each test image and writes the result to the default logger (recovered with logger.getLogger()). The ti… --- ## [Problem downloading new extracted annotation regions](https://community.drivendata.org/t/problem-downloading-new-extracted-annotation-regions/5112)
**Author:** [@booster](https://community.drivendata.org/u/booster)\ **Replies:** 7\ **Last updated:** [October 2, 2020, 10:46pm UTC](https://community.drivendata.org/t/problem-downloading-new-extracted-annotation-regions/5112 "2020-10-02T22:46:37Z")
Hi Bull (and others), I downloaded the original files with this command: aws s3 sync s3://drivendata-competition-sfp-public-eu/train/annotated\_regions/ /mydir --no-sign-request Now I try to use it but get this error… --- ## [Image data regarding detect lesions and how to visualize it and where to get it](https://community.drivendata.org/t/image-data-regarding-detect-lesions-and-how-to-visualize-it-and-where-to-get-it/5155)
**Author:** [@roshaan](https://community.drivendata.org/u/roshaan)\ **Replies:** 1\ **Last updated:** [September 25, 2020, 10:13pm UTC](https://community.drivendata.org/t/image-data-regarding-detect-lesions-and-how-to-visualize-it-and-where-to-get-it/5155 "2020-09-25T22:13:34Z")
Hi, I am new to this competition. I am confused about data as in data resources we are given data in textual form in csv files but where are the real image data so that we can visualize it thank you --- ## [Leaderboard ordering](https://community.drivendata.org/t/leaderboard-ordering/5093)
**Author:** [@cbinners](https://community.drivendata.org/u/cbinners)\ **Replies:** 1\ **Last updated:** [September 15, 2020, 10:49pm UTC](https://community.drivendata.org/t/leaderboard-ordering/5093 "2020-09-15T22:49:59Z")
Is the leaderboard ordering incorrect? I assumed with Class Score (== 1-error), higher would be better?